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'''I. Introduction.'''
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[[Category:Sednterp]] [[Category:Table of Contents]]
 +
Click here to download a PDF of every page of the this Wiki [[File:Pdfdownload.png‎|link=http://bitcwiki.sr.unh.edu/index.php?title=Category:Sednterp&action=pdfbook]]
  
'''II.  [[Downloads]].'''
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'''IIntroduction.''' [[File:Pdfdownload.png‎|link=http://bitcwiki.sr.unh.edu/index.php?title=Category:Introduction&action=pdfbook]]
  
'''A.  [[Simple Step Through]].'''
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'''II.  [[Downloads]].'''  
  
'''B.  [[Overview]].'''
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'''III. [http://sednterp.unh.edu Sednterp Web]''' [[File:Pdfdownload.png‎|link=http://bitcwiki.sr.unh.edu/index.php?title=Category:Sednterp%20Web&action=pdfbook]]
  
1. [[General Information on Sednterp]].
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:'''A. [[Introduction to Sednterp Web]]'''
  
2. [[General Glossary]].
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:'''B. [[Differences Desktop and Web version of Sednterp]]'''
  
3. [[Table of symbols]] Used.
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::1. [[Save and Load XML files Sednterp Web]]
  
'''C. Features of Sednterp Program.'''
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'''IV. [[Sednterp User Modules]]''' [[File:Pdfdownload.png‎|link=http://bitcwiki.sr.unh.edu/index.php?title=Category:Modules&action=pdfbook]]
  
1.  [[List of Parameters for Input]].
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'''V.  [[Bug Reports]].'''
  
2.  [[List of Interpolations Available]].
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:'''A.  [[Simple Step Through]].'''
  
3.  [[List of Results]].
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:'''B.  [[Overview]].'''
  
4.  [[List of Graphs]].
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::1.  [[General Information on Sednterp]].
  
5.  [[List of Standard File Endings]].
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::2.  [[General Glossary]].
  
'''D.  [[Files Necessary to Run Sednterp]].'''
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::3.  [[Table of symbols]] Used.
  
'''E[[Development and Distribution of Sednterp]].'''
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:'''CFeatures of Sednterp Program.'''
  
'''F.  [[Who to Contact for Information and Feedback]].'''
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::1.  [[List of Parameters for Input]].
  
'''G.  [[Acknowledgments]].'''
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::2.  [[List of Interpolations Available]].
  
'''IITheory of Computer Aided Interpretation of Sedimentation Data.'''
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::3[[List of Results]].
  
'''A.  [[Primary Reference]].'''
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::4.  [[List of Graphs]].
  
'''B.  [[Introduction]].'''
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:'''D.  [[Development and Distribution of Sednterp]].'''
  
'''CBackground.'''
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:'''E[[Who to Contact for Information and Feedback]].'''
  
1.  [[Overview of Information Needed]].
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:'''F.  [[Acknowledgments]].'''
  
2.  [[Sedimentation Coefficient]].
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'''VITheory of Computer Aided Interpretation of Sedimentation Data.''' [[File:Pdfdownload.png‎|link=http://bitcwiki.sr.unh.edu/index.php?title=Category:Theory%20of%20Computer%20Aided%20Interpretation%20of%20Sedimentation%20Data&action=pdfbook]]
  
3.  [[Reduced Apparent Molecular Weight]]:
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:'''A.  [[Primary Reference]].'''
  
4.  [[Buffer and Solute Solution Parameters]].
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:'''B.  [[Introduction]].'''
  
5[[Limitations]].
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:'''CBackground.'''
  
'''DCalculations Implemented in Sednterp.'''
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::1[[Overview of Information Needed]].
  
1.  [[Molecular Weight]].
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::2.  [[Sedimentation Coefficient]].
  
2.  [[Buoyant Molecular Weight]].
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::3.  [[Reduced Apparent Molecular Weight]]:
  
3.  [[Calculating v-bar estimates]].
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::4.  [[Buffer and Solute Solution Parameters]].
  
4.  [[Calculating Denatured v-bar Estimates]].
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::5.  [[Limitations]].
  
5Calculating the Density of the Buffer.
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:'''DCalculations Implemented in Sednterp.'''
  
a.  [[Calculating Density Increments]].
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::1.  [[Molecular Weight]].
  
1) Buffer components.
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::2. [[Buoyant Molecular Weight]].
  
2) Isotopes of water.
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::3. [[Calculating v-bar estimates]].
  
b.  [[Calculating the Density Temperature Correction]].
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::4.  [[Calculating Denatured v-bar Estimates]].
  
6[[Calculating Viscosity]].
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::5.  Calculating the Density of the Buffer.
  
7.  [[Converting s to s-20-w]].
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:::a.  [[Calculating Density Increments]].
  
8. [[Calculating the Equivalent Radius]].
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::::1) Buffer components.
  
9. Estimation of Protein Hydration.
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::::2) Isotopes of water.
  
a.  [[Limitations on Estimation of Hydration and Asymmetry]].
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:::b.  [[Calculating the Density Temperature Correction]].
  
b.  [[Calculating Maximum Hydration]].
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::6.  [[Calculating Viscosity]].
  
c.  [[Estimating Hydration]].
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::7.  [[Converting s to s-20-w]].
  
d. [[Calculating Hydration from Asymmetry Estimates]].
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::8. [[Calculating the Equivalent Radius]].
  
10.  Estimation of Protein Asymmetry.
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::9.  Estimation of Protein Hydration.
  
a.   [[Calculating Ellipsoid Asymmetry]].
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:::a. [[Limitations on Estimation of Hydration and Asymmetry]].
  
b.   [[Calculating Cylindrical Asymmetry]].  
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:::b. [[Calculating Maximum Hydration]].
  
11. [[Calculating the Stokes Radius]]
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:::c. [[Estimating Hydration]].
  
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:::d. [[Calculating Hydration from Asymmetry Estimates]].
  
'''E[[References]]'''
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::10Estimation of Protein Asymmetry.
  
'''III. Sednterp Program Control and Screens.'''
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:::a.   [[Calculating Ellipsoid Asymmetry]].
  
'''A. [[Overview of Sednterp Screens]].'''
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:::b.   [[Calculating Cylindrical Asymmetry]].  
  
'''B. [[Programming Strategy]].'''
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::11. [[Calculating the Stokes Radius]]
  
1.  [[Sednterp Uses Default Values]].
 
  
2.  [[The User Controls Program Information and Flow]].
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:'''E.  [[References]]'''  [[File:Pdfdownload.png‎|link=http://bitcwiki.sr.unh.edu/index.php?title=Category:References&action=pdfbook]]
  
3.  [[A Sparse Main Form Leads to Other Program Elements]].
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'''VII. Sednterp Program Control and Screens.''' [[File:Pdfdownload.png‎|link=http://bitcwiki.sr.unh.edu/index.php?title=Category:Sednterp%20Program%20Control%20and%20Screens&action=pdfbook]]
  
4.  [[Description of the Access Databases]]
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:'''A.  [[Overview of Sednterp Screens]].'''
  
'''CThe Main Form.'''
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:'''B[[Programming Strategy]].'''
  
1.  [[The File Menu]].
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::1.  [[Sednterp Uses Default Values]].
  
2.  [[The Results Menu]].
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::2.  [[The User Controls Program Information and Flow]].
  
3.  [[The Estimating Databases Menu]].
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::3.  [[A Sparse Main Form Leads to Other Program Elements]].
  
4.  [[The Experiment Section]].
 
  
5[[The Sample Section]].
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:'''C.  The Main Form.'''
  
6.  [[The Buffer Section]].
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::1.  [[The File Menu]].
  
'''DOther Forms.'''
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::2[[The Results Menu]].
  
1. [[The Saving Data in Database Form]].
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::3. [[The Estimating Databases Menu]].
  
2. [[The Results Form]].
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::4. [[The Experiment Section]].
  
3. [[The Sample Composition Form]].
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::5. [[The Sample Section]].
  
4. [[Buffer Components Form]].
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::6. [[The Buffer Section]].
  
'''E.'''  [[Graphs Available]].
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:'''D.  Other Forms.'''
 +
 
 +
::1. [[The Saving Data in Database Form]].
 +
 
 +
::2. [[The Results Form]].
 +
 
 +
::3. [[The Sample Composition Form]].
 +
 
 +
::4. [[Buffer Components Form]].
 +
 
 +
:'''E.'''  [[Graphs Available]].
 +
 
 +
:'''F.'''  [[Schema]].
 +
 
 +
Download this page [[File:Pdfdownload.png‎|link=http://bitcwiki.sr.unh.edu/index.php?title=Category:Table%20of%20Contents&action=pdfbook ]]

Latest revision as of 20:27, 23 August 2012

Click here to download a PDF of every page of the this Wiki Pdfdownload.png

I. Introduction. Pdfdownload.png

II. Downloads.

III. Sednterp Web Pdfdownload.png

A. Introduction to Sednterp Web
B. Differences Desktop and Web version of Sednterp
1. Save and Load XML files Sednterp Web

IV. Sednterp User Modules Pdfdownload.png

V. Bug Reports.

A. Simple Step Through.
B. Overview.
1. General Information on Sednterp.
2. General Glossary.
3. Table of symbols Used.
C. Features of Sednterp Program.
1. List of Parameters for Input.
2. List of Interpolations Available.
3. List of Results.
4. List of Graphs.
D. Development and Distribution of Sednterp.
E. Who to Contact for Information and Feedback.
F. Acknowledgments.

VI. Theory of Computer Aided Interpretation of Sedimentation Data. Pdfdownload.png

A. Primary Reference.
B. Introduction.
C. Background.
1. Overview of Information Needed.
2. Sedimentation Coefficient.
3. Reduced Apparent Molecular Weight:
4. Buffer and Solute Solution Parameters.
5. Limitations.
D. Calculations Implemented in Sednterp.
1. Molecular Weight.
2. Buoyant Molecular Weight.
3. Calculating v-bar estimates.
4. Calculating Denatured v-bar Estimates.
5. Calculating the Density of the Buffer.
a. Calculating Density Increments.
1) Buffer components.
2) Isotopes of water.
b. Calculating the Density Temperature Correction.
6. Calculating Viscosity.
7. Converting s to s-20-w.
8. Calculating the Equivalent Radius.
9. Estimation of Protein Hydration.
a. Limitations on Estimation of Hydration and Asymmetry.
b. Calculating Maximum Hydration.
c. Estimating Hydration.
d. Calculating Hydration from Asymmetry Estimates.
10. Estimation of Protein Asymmetry.
a. Calculating Ellipsoid Asymmetry.
b. Calculating Cylindrical Asymmetry.
11. Calculating the Stokes Radius


E. References Pdfdownload.png

VII. Sednterp Program Control and Screens. Pdfdownload.png

A. Overview of Sednterp Screens.
B. Programming Strategy.
1. Sednterp Uses Default Values.
2. The User Controls Program Information and Flow.
3. A Sparse Main Form Leads to Other Program Elements.


C. The Main Form.
1. The File Menu.
2. The Results Menu.
3. The Estimating Databases Menu.
4. The Experiment Section.
5. The Sample Section.
6. The Buffer Section.
D. Other Forms.
1. The Saving Data in Database Form.
2. The Results Form.
3. The Sample Composition Form.
4. Buffer Components Form.
E. Graphs Available.
F. Schema.

Download this page Pdfdownload.png